pyfibre.addons.shg_pl_trans.shg_pl_trans_analyser module¶

class pyfibre.addons.shg_pl_trans.shg_pl_trans_analyser.SHGPLTransAnalyser[source]¶

Bases: pyfibre.addons.shg_pl_trans.shg_analyser.SHGAnalyser

create_metrics(sigma)[source]¶

Perform metric analysis on segmented image

Parameters: sigma (float) –
Returns: databases
Return type: list of pd.DataFrame

pyfibre.addons.shg_pl_trans.shg_pl_trans_analyser.load_cell_segments(file_name, *, klass=<class 'pyfibre.model.objects.segments.CellSegment'>, mode='array', file_type='cell_segments', **kwargs)¶: Load a list of ABCPyFibreObject subclass

pyfibre.addons.shg_pl_trans.shg_pl_trans_analyser.load_fibre_segments(file_name, *, klass=<class 'pyfibre.model.objects.segments.FibreSegment'>, mode='array', file_type='fibre_segments', **kwargs)¶: Load a list of ABCPyFibreObject subclass